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エリスロバクター科

出典: フリー百科事典『ウィキペディア（Wikipedia）』
エリスロバクター科
分類
ドメイン : 真正細菌
Bacteria
門 : プロテオバクテリア門
Pseudomonadota
綱 : アルファプロテオバクテリア綱
Alphaproteobacteria
目 : スフィンゴモナス目
Sphingomonadales
科 : エリスロバクター科
Erythrobacteraceae
学名
Erythrobacteraceae
Lee et al. 2005[1]
(IJSEMリストに掲載 2006[2])
修正 Hördt et al. 2020[3]
(IJSEMリストに掲載 2020[4])
タイプ属
エリスロバクター属
Erythrobacter
芝恒男、清水潮 1982[5]
下位分類（属）[23]

エリスロバクター科（ーか、Erythrobacteraceae）は真正細菌プロテオバクテリア門アルファプロテオバクテリア綱スフィンゴモナス目の科の一つである。

概要

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グラム陰性の桿菌又は多形性球菌である。運動性又は一部の種は非運動性である[1]。胞子は形成しない。化学有機栄養性且つ好気性。一部の種はビオチンを要求する[15]。

多くの種は細胞にカロテノイドとバクテリオクロロフィル a（BChl a）を含む[3]。この科の細菌は淡水から単離された[15]。

系統樹

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現在の分類体系はList of Prokaryotic names with Standing in Nomenclatureに従い、下記の系統樹は全ゲノム解析結果に基づく[8][19]。

 
エリスロバクター科
 
 
 
 
 
 
 
 

Qipengyuania

 
 

Alteriqipengyuania

 
 
 
 

Parerythrobacter

 
 
 

Altererythrobacter

 
 

エリスロバクター属
Erythrobacter

 
 
 
 
 
 
 

Pontixanthobacter

 
 

Pseudopontixanthobacter

 
 
 
 

Alteripontixanthobacter

 
 

Parapontixanthobacter

 
 
 
 
 

Pelagerythrobacter

 
 
 

Tsuneonella

 
 
 
 
 

Altericroceibacterium

 
 

Croceibacterium

 
 
 
 
 

Alteraurantiacibacter

 
 

Aurantiacibacter

 
 
 

Paraurantiacibacter

 
 
 
 
 

Croceicoccus

 
 
 

ノボスフィンゴビウム属
Novosphingobium

 
 
外群

スフィンゴモナス科
Sphingomonadaceae

 
 

脚注

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  1. ^ a b Kyung-Bum Lee, Chi-Te Liu, Yojiro Anzai, Hongik Kim, Toshihiro Aono, Hiroshi Oyaizu (01 September 2005). “The hierarchical system of the ‘Alphaproteobacteria’: description of Hyphomonadaceae fam. nov., Xanthobacteraceae fam. nov. and Erythrobacteraceae fam. nov.”. International Journal of Systematic and Evolutionary Microbiology 55 (5): 1907-1919. doi:10.1099/ijs.0.63663-0. PMID 16166687. 
  2. ^ “Notification that new names and new combinations have appeared in volume 55, part 5, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 56 (1): 7-9. (01 January 2006). doi:10.1099/ijs.0.64166-0. 
  3. ^ a b c Anton Hördt Marina García López, Jan P. Meier-Kolthoff, Marcel Schleuning, Lisa-Maria Weinhold, Brian J. Tindall, Sabine Gronow, Nikos C. Kyrpides, Tanja Woyke, Markus Göker (07 April 2020). “Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria”. Frontiers in Microbiology 11: 468. doi:10.3389/fmicb.2020.00468. 
  4. ^ Aharon Oren, George Garrity (30 July 2020). “Notification of changes in taxonomic opinion previously published outside the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 70 (7): 4061-4090. doi:10.1099/ijsem.0.004245. 
  5. ^ a b 芝恒男、清水潮 (01 April 1982). “Erythrobacter longus gen. nov., sp. nov., an Aerobic Bacterium Which Contains Bacteriochlorophyll”. International Journal of Systematic and Evolutionary Microbiology 32 (2). doi:10.1099/00207713-32-2-211. 
  6. ^ Hua-Peng Xue, Dao-Feng Zhang, Lin Xu, Xiang-Ning Wang, Ai-Hua Zhang, Jian-Ke Huang & Chuang Liu (13 April 2021). “Actirhodobacter atriluteus gen. nov., sp. nov., isolated from the surface water of the Yellow Sea”. Antonie van Leeuwenhoek 114: 1059–1068. doi:10.1007/s10482-021-01576-w. PMID 33847861. 
  7. ^ Aharon Oren and George M. Garrity (01 December 2021). “Valid publication of new names and new combinations effectively published outside the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 71 (11). doi:10.1099/ijsem.0.005096. 
  8. ^ a b c d e f g h i j k l “Genomic-based taxonomic classification of the family Erythrobacteraceae.”. Int J Syst Evol Microbiol 70 (8): 4470–4495. (2020). doi:10.1099/ijsem.0.004293. PMC 7660246. PMID 32726199. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7660246/. 
  9. ^ a b c d e f g h i j k Aharon Oren and George M. Garrity (25 November 2020). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 70, part 8 of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 70 (11): 5602-5608. doi:10.1099/ijsem.0.004464. 
  10. ^ Kae Kyoung Kwon, Jung-Hee Woo, Sung-Hyun Yang, Ji-Hyun Kang, Sung Gyun Kang, Sang-Jin Kim, Takako Sato and Chiaki Kato (01 October 2007). “Altererythrobacter epoxidivorans gen. nov., sp. nov., an epoxide hydrolase-active, mesophilic marine bacterium isolated from cold-seep sediment, and reclassification of Erythrobacter luteolus Yoon et al. 2005 as Altererythrobacter luteolus comb. nov.”. International Journal of Systematic and Evolutionary Microbiology 57 (10). doi:10.1099/ijs.0.64863-0. 
  11. ^ “Notification that new names and new combinations have appeared in volume 57, part 10, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 58 (1). (01 January 2008). doi:10.1099/ijs.0.65722-0. 
  12. ^ Aharon Oren and George Garrity (30 July 2020). “List of new names and new combinations previously effectively, but not validly, published”. International Journal of Systematic and Evolutionary Microbiology 70 (7): 4043-4049. doi:10.1099/ijsem.0.004244. 
  13. ^ Yong-Hong Liu, Bao-Zhu Fang, Zhou-Yan Dong, Li Li, Osama Abdalla Abdelshafy Mohamad, Yong-Guang Zhang, Dilfuza Egamberdieva, Min Xiao and Wen-Jun Li (01 August 2019). “Croceibacterium gen. nov., with description of Croceibacterium ferulae sp. nov., an endophytic bacterium isolated from Ferula sinkiangensis K. M. Shen and reclassification of Porphyrobacter mercurialis as Croceibacterium mercuriale comb. nov.”. International Journal of Systematic and Evolutionary Microbiology 69 (8): 2547-2554. doi:10.1099/ijsem.0.003540. 
  14. ^ Aharon Oren and George Garrity (01 November 2019). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 69, part 8 of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 69 (11): 3315-3317. doi:10.1099/ijsem.0.003692. 
  15. ^ a b c Xue-Wei Xu, Yue-Hong Wu, Chun-Sheng Wang, Xiao-Gu Wang, Aharon Oren and Min Wu (01 September 2009). “Croceicoccus marinus gen. nov., sp. nov., a yellow-pigmented bacterium from deep-sea sediment, and emended description of the family Erythrobacteraceae”. International Journal of Systematic and Evolutionary Microbiology 59 (9). doi:10.1099/ijs.0.004267-0. 
  16. ^ “Notification that new names and new combinations have appeared in volume 59, part 9, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 59 (12): 2921-2922. (01 December 2009). doi:10.1099/ijs.0.019802-0. 
  17. ^ M Takeuchi, K Hamana and A Hiraishi (01 July 2001). “Proposal of the genus Sphingomonas sensu stricto and three new genera, Sphingobium, Novosphingobium and Sphingopyxis, on the basis of phylogenetic and chemotaxonomic analyses.”. International Journal of Systematic and Evolutionary Microbiology 51 (4): 1621-1623. doi:10.1099/00207713-51-4-1405. 
  18. ^ “Notification that new names and new combinations have appeared in volume 51, part 4, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 51: 1621-1623. (01 September 2001). doi:10.1099/00207713-51-5-1621. 
  19. ^ a b “Pseudopontixanthobacter vadosimaris gen. nov., sp. nov., isolated from shallow sea near Kueishan Island”. Int J Syst Evol Microbiol 70 (12): 6444–6449. (2020). doi:10.1099/ijsem.0.004552. PMID 33174831. 
  20. ^ Aharon Oren and George Garrity (31 March 2021). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 70, part 12 of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 71 (3). doi:10.1099/ijsem.0.004656. 
  21. ^ Xiao-Min Feng, Yong-Xin Mo, Lu Han, Yuichi Nogi, You-Hai Zhu and Jie Lv (01 October 2015). “Qipengyuania sediminis gen. nov., sp. nov., a member of the family Erythrobacteraceae isolated from subterrestrial sediment”. International Journal of Systematic and Evolutionary Microbiology 65 (Pt_10): 3658-3665. doi:10.1099/ijsem.0.000472. 
  22. ^ Aharon Oren and George Garrity (01 January 2016). “Notification that new names of prokaryotes, new combinations and new taxonomic opinions have appeared in volume 65, part 10, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 66 (1). doi:10.1099/ijsem.0.000745. 
  23. ^ Jean P. Euzéby, Aidan C. Parte. “Family Erythrobacteraceae”. List of Prokaryotic names with Standing in Nomenclature. 2024年4月24日閲覧。

参考文献

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  • Lee, K.-B. (1 September 2005). “The hierarchical system of the 'Alphaproteobacteria': Description of Hyphomonadaceae fam. nov., Xanthobacteraceae fam. nov. and Erythrobacteraceae fam. nov.”. International Journal of Systematic and Evolutionary Microbiology 55 (5): 1907–1919. doi:10.1099/ijs.0.63663-0. PMID 16166687. 
  • Kwon, K. K.; Woo, J.-H.; Yang, S.-H.; Kang, J.-H.; Kang, S. G.; Kim, S.-J.; Sato, T.; Kato, C. (1 October 2007). “Altererythrobacter epoxidivorans gen. nov., sp. nov., an epoxide hydrolase-active, mesophilic marine bacterium isolated from cold-seep sediment, and reclassification of Erythrobacter luteolus Yoon et al. 2005 as Altererythrobacter luteolus comb. nov.”. International Journal of Systematic and Evolutionary Microbiology 57 (10): 2207–2211. doi:10.1099/ijs.0.64863-0. PMID 17911284. 
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